BaseErrorMetric

Metrics

Category Metrics

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Overview

An error metric for the errors in bases.

This table summarizes the values that are specific to this metric.

Metric	Summary
ERROR_BASES	The number of bases that disagree with the reference
Q_SCORE	The (phred) rate of bases that disagree with the reference

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GATK version 4.6.2.0 built at Sun, 13 Apr 2025 13:21:43 -0400.