Metrics
This table summarizes the values that are specific to this metric.
| Metric | Summary |
|---|---|
| TILE | The Tile that is described by this metric |
| X | The X coordinate of the read within the tile |
| Y | The Y coordinate of the read within the tile |
| NUM_N | The number of Ns found in this read |
| NUM_Q_GT_TWO | The number of Quality scores greater than 2 found in this read |
| CLASSIFICATION | The classification of this read: {EMPTY, POLYCLONAL, MISALIGNED, UNKNOWN} (See PFFailSummaryMetric for explanation regarding the possible classification.) |
See also General Documentation | Tool Docs Index Tool Documentation Index | Support Forum
GATK version 4.6.2.0 built at Sun, 13 Apr 2025 13:21:43 -0400.